Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTATGGTGCAGCTGTC
..(((((((((..((((((..&)))))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_153201
GeneSymbolHSPA8
Binding site1186,1203
Score0.885
Seed1
Au0.485
Energy-19.1
Binding len17
Me-9.593
Phylopstem5.8656687000000005
Phylopflank4.935443445000001
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure