Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCACAATCCTGCTGCT
..(((((.(.((((((..(((&)))))))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_153206
GeneSymbolJAML
Binding site848,865
Score0.923
Seed0
Au0.544
Energy-17.3
Binding len17
Me-8.513
Phylopstem0.14162658333333333
Phylopflank0.35830358625
Longest consecutive pairings10
Position of longest consecutive pairings7
Pairings in 3prime end6
PositionCDS
2D Structure