Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCGCTCTCCCAGCTGTC
..(((((((.((......((.&)).....))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_153206
GeneSymbolJAML
Binding site1271,1288
Score0.846
Seed1
Au0.5
Energy-15.3
Binding len17
Me-9.314
Phylopstem0.6446212857142857
Phylopflank0.86743084075
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure