Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGACTTCTGATGCTGCAAA
(((((((..(((..((((((.&))))).)..)))..))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_153211
GeneSymbolTTC39C
Binding site556,578
Score0.923
Seed1
Au0.559
Energy-19.5
Binding len22
Me-9.454
Phylopstem2.398231142857143
Phylopflank3.4532350325000003
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure