Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCTCAGGAAGCTCGCCCAGGGGCCAATGTGG
(((((((((((((((((((...&)))))))).........))))))))..))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_153212
GeneSymbolGJB4
Binding site1289,1320
Score0.846
Seed1
Au0.338
Energy-23.5
Binding len31
Me-3.938
Phylopstem-0.2148258000000001
Phylopflank-0.3892431000000001
Longest consecutive pairings8
Position of longest consecutive pairings23
Pairings in 3prime end5
Position3UTR
2D Structure