Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGATCAAGTAACATAAGAAATCAACCAAGATACATTGGCCAGGTG
(((((((...(((((((..((.&.))..)))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_153216
GeneSymbolPOU5F2
Binding site6508,6553
Score1.0
Seed1
Au0.544
Energy-19.7
Binding len20
Me-8.55
Phylopstem0.0830078857142857
Phylopflank0.020139142499999988
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure