Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTGCCCAGGAGCACCAGTGTGCTTTCACCTGGGACTGGGGCTCCCAGTGG
(((((((((((((((((((((.&))))))))))).........................)))))...))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_153216
GeneSymbolPOU5F2
Binding site888,938
Score1.0
Seed1
Au0.441
Energy-25.0
Binding len50
Me-3.938
Phylopstem0.34641406081632664
Phylopflank0.43138659300000004
Longest consecutive pairings11
Position of longest consecutive pairings39
Pairings in 3prime end7
PositionCDS
2D Structure