Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCGCATAGCTGCATCATTGACACAGCTGCC
..((((((((((((((..((.&))..)))))))))...........))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_153216
GeneSymbolPOU5F2
Binding site6201,6231
Score0.923
Seed1
Au0.441
Energy-19.6
Binding len30
Me-4.957
Phylopstem-0.025950823999999994
Phylopflank0.116339245
Longest consecutive pairings9
Position of longest consecutive pairings17
Pairings in 3prime end5
Position3UTR
2D Structure