Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGACAACCGTGGTGTTCTATGTTGTAAC
((((((((((((((((.((((&)))).))))))))))).........))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_153217
GeneSymbolTMEM174
Binding site844,875
Score0.846
Seed1
Au0.515
Energy-21.7
Binding len31
Me-3.938
Phylopstem-0.12228722800000005
Phylopflank-0.09913327999999998
Longest consecutive pairings11
Position of longest consecutive pairings15
Pairings in 3prime end7
Position3UTR
2D Structure