Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTAGTAGTTTTGTTTCAGTGGCATTAGCAACTGCAGCTAGCAT
.(((((((((((((((.....&.)))))))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_153226
GeneSymbolSLC35G1
Binding site1836,1880
Score1.0
Seed1
Au0.676
Energy-24.8
Binding len18
Me-3.793
Phylopstem0.94166760625
Phylopflank0.3547057287499999
Longest consecutive pairings12
Position of longest consecutive pairings5
Pairings in 3prime end3
Position3UTR
2D Structure