Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTTAAAGAAGATGGGCAAACGCCTGGATTATCTCAACCTAAAAGGGGCCAGG
..(((((((((((.(((((.((&.)).)))))))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_153230
GeneSymbolFBXO39
Binding site604,657
Score0.923
Seed1
Au0.456
Energy-25.7
Binding len21
Me-5.814
Phylopstem2.3695832727272728
Phylopflank1.9991260649999998
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure