Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCAACTACAACTGTATCTCCGACGAGCTGCT
..(((((((((((((((((((&))))....)))))))))..........)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_153230
GeneSymbolFBXO39
Binding site826,860
Score1.0
Seed1
Au0.485
Energy-21.5
Binding len34
Me-4.957
Phylopstem2.986193145454546
Phylopflank1.9968750400000002
Longest consecutive pairings9
Position of longest consecutive pairings17
Pairings in 3prime end8
PositionCDS
2D Structure