Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTTAGCTCTGTTTGTTGTTCAAGAACATAAGCAACCAGTAGCTCAAA
(((.((((((((((((.....&.)))))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_153234
GeneSymbolLIX1
Binding site1815,1864
Score0.846
Seed0
Au0.691
Energy-19.0
Binding len18
Me-6.97
Phylopstem-0.003910900000000001
Phylopflank0.15218770250000002
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure