Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCCAGCCGCGCAACGTGGCTGACAC
.(((((((((.(((((..(((&.)))..)))))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_153235
GeneSymbolTXLNB
Binding site2098,2125
Score1.0
Seed1
Au0.338
Energy-20.6
Binding len22
Me-6.618
Phylopstem0.46068352
Phylopflank0.6791124650000001
Longest consecutive pairings12
Position of longest consecutive pairings4
Pairings in 3prime end6
PositionCDS
2D Structure