Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCACAGATGCAGACACTTGCCCAGATAGGAGCAGA
..((.((((((.(((((((((.&.))))))))).)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001330498
GeneSymbolHMBOX1
Binding site2746,2781
Score1.0
Seed0
Au0.515
Energy-27.0
Binding len20
Me-12.423
Phylopstem1.3528837777777778
Phylopflank0.70595390375
Longest consecutive pairings9
Position of longest consecutive pairings10
Pairings in 3prime end7
Position3UTR
2D Structure