Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGAAACTATGCCAAACCAAAGAGCAGCTGCAGT
(((((((((((((((((.(((&.))).)))..)))).....)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_153251
GeneSymbolZDHHC20
Binding site4270,4306
Score0.923
Seed1
Au0.647
Energy-22.1
Binding len30
Me-3.938
Phylopstem4.698057616666667
Phylopflank3.5224820587499996
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure