Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACACAACAACCGGCGGCTGCAGG
((((((((((((((((...((&))...))))))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_153253
GeneSymbolSIPA1
Binding site3325,3348
Score0.846
Seed1
Au0.338
Energy-25.9
Binding len23
Me-3.938
Phylopstem1.8952018588235295
Phylopflank2.2150792287499996
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure