Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ATCTAGAGAGTCCAAGCTGGTGA
((((((((.((((((((((...&))))))))))....)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_153259
GeneSymbolMCOLN2
Binding site2390,2413
Score0.846
Seed1
Au0.574
Energy-20.9
Binding len23
Me-4.994
Phylopstem4.4949907
Phylopflank2.8812763849999996
Longest consecutive pairings10
Position of longest consecutive pairings13
Pairings in 3prime end5
Position3UTR
2D Structure