Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCTTCTGAATAGCTGCAAA
((((((((((((..(((((((&)))))))..)))..))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_153263
GeneSymbolZNF549
Binding site677,701
Score0.923
Seed1
Au0.544
Energy-25.9
Binding len24
Me-6.084
Phylopstem-0.22941435000000007
Phylopflank-0.6590789962500001
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure