Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAATCTGCATCCCGGGGCCAGGTG
(((((((.....((((((((((&))))))))))......))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_153264
GeneSymbolCOL6A5
Binding site4226,4250
Score0.923
Seed1
Au0.515
Energy-23.0
Binding len24
Me-14.722
Phylopstem1.8795388
Phylopflank1.3653813550000002
Longest consecutive pairings10
Position of longest consecutive pairings14
Pairings in 3prime end8
PositionCDS
2D Structure