Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTCTCAGGGCACGAGGCGTTCGCTGCGGGAATCCACCTGCAGCTGTG
..((((((((((.((......&.)).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_153264
GeneSymbolCOL6A5
Binding site84,132
Score0.846
Seed1
Au0.25
Energy-19.3
Binding len15
Me-6.479
Phylopstem0.5437226099999999
Phylopflank0.45589908874999996
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end2
Position5UTR
2D Structure