Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTCGTGACAGCAGCTGCAT
.(((((((((.((((..(((.&)))..)))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_153265
GeneSymbolEML3
Binding site1560,1580
Score0.827
Seed1
Au0.412
Energy-23.0
Binding len20
Me-6.851
Phylopstem5.940898888888888
Phylopflank3.3768032499999996
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure