Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGTGGAAGCCAGCTGCAAT
(((((((((.(.((.((.(((&))).)).)).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_153267
GeneSymbolMAMDC2
Binding site1358,1379
Score1.0
Seed1
Au0.544
Energy-21.8
Binding len21
Me-9.262
Phylopstem3.0351600000000003
Phylopflank3.05286102625
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure