Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTCTTATGCGCCAGCTGCAGC
(((((((((((...(((((((&)).))))).))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_153269
GeneSymbolC20orf96
Binding site821,843
Score0.846
Seed1
Au0.441
Energy-19.7
Binding len22
Me-9.43
Phylopstem0.054685025833333324
Phylopflank1.1793290517499997
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure