Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGGACACAGGAGGGCTATGAACCACTGTGCCGTGGCTGCAC
.((((((((((((.....(((&.))).....)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_153271
GeneSymbolSNX33
Binding site6000,6043
Score0.923
Seed1
Au0.353
Energy-24.4
Binding len22
Me-5.619
Phylopstem-0.1684560083333333
Phylopflank-0.012646851249999952
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure