Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTCGGACTCAGCTCCCGGAGCAACCCAGCTGCGGA
(((((((((.((((((..((.&.))...))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_153276
GeneSymbolSLC22A6
Binding site133,169
Score0.923
Seed1
Au0.324
Energy-25.9
Binding len22
Me-5.18
Phylopstem0.009903388888888889
Phylopflank-0.062296611249999995
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure