Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACACGGCTGCTGCAGCTGTG
..(((((((((((.((...((&))...)).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_153280
GeneSymbolUBA1
Binding site1692,1712
Score1.0
Seed1
Au0.471
Energy-21.9
Binding len20
Me-5.814
Phylopstem3.616600090909091
Phylopflank4.04561499375
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure