Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACATCCGGCAGCTGCT
..((((((((((.(((.....&))).))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_153280
GeneSymbolUBA1
Binding site2265,2281
Score0.923
Seed1
Au0.426
Energy-21.3
Binding len16
Me-6.246
Phylopstem3.9408729090909094
Phylopflank3.9579843499999994
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure