Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGGGTCTGGCCAGGG
.((((((.....((.((((...&)))).))...)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_153282
GeneSymbolHYAL1
Binding site1393,1410
Score0.846
Seed1
Au0.544
Energy-16.0
Binding len17
Me-15.313
Phylopstem4.674549666666667
Phylopflank2.9724670600000005
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure