Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCGGGACAGCTGTTCCTTTGGGCTGCAGA
((((((((((((((((..(((&)))...)))))))).......)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_153321
GeneSymbolPMP22
Binding site99,129
Score0.846
Seed1
Au0.412
Energy-20.5
Binding len30
Me-3.938
Phylopstem2.0104054478260873
Phylopflank2.6145902850000002
Longest consecutive pairings8
Position of longest consecutive pairings16
Pairings in 3prime end6
Position5UTR
2D Structure