Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGGCGCCTGCCTGTGCCACGCAGGCTGGTGGGGCCGCAGCTGCAAC
((((((((((((((.((.(((&.)))..)).)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_153334
GeneSymbolSCARF2
Binding site659,707
Score0.846
Seed1
Au0.324
Energy-29.8
Binding len24
Me-4.673
Phylopstem-0.09071428571428573
Phylopflank-0.26656250000000004
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure