Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCGGGAGAGCAGAGGGTGCTCAGGAGGGTAAGGCCAGG
..((((((((((((((((((..&.))))))))))))...)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_153335
GeneSymbolSTRADA
Binding site1306,1344
Score1.0
Seed1
Au0.412
Energy-27.2
Binding len23
Me-4.957
Phylopstem0.04533822857142857
Phylopflank-0.25124370000000007
Longest consecutive pairings12
Position of longest consecutive pairings10
Pairings in 3prime end6
PositionCDS
2D Structure