Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGCTCTCGGCGCGGCGGCGGCTGCT
..((((((((.(((((.....&.))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_153335
GeneSymbolSTRADA
Binding site8,35
Score0.846
Seed1
Au0.25
Energy-23.6
Binding len16
Me-7.782
Phylopstem0.4867597375
Phylopflank0.7094428012500001
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
Position5UTR
2D Structure