Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCACCGGCTGCAGCAGGAGCAGG
((((.((((((((((...(((&)))...))))))))))....)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_153336
GeneSymbolPSTK
Binding site193,218
Score0.846
Seed0
Au0.309
Energy-20.7
Binding len25
Me-8.29
Phylopstem0.37815304000000005
Phylopflank1.7253503524999996
Longest consecutive pairings10
Position of longest consecutive pairings9
Pairings in 3prime end5
PositionCDS
2D Structure