Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTCGGCATCCTCAGTTCTGGTTTGCACCCAGAAAGGGGGTAGG
..(((.(((((((((((((...&.))))))))))))).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_153337
GeneSymbolSNX20
Binding site2262,2305
Score0.923
Seed0
Au0.426
Energy-28.5
Binding len19
Me-6.858
Phylopstem0.2710503615384615
Phylopflank0.17192373000000002
Longest consecutive pairings13
Position of longest consecutive pairings5
Pairings in 3prime end5
Position3UTR
2D Structure