Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGAAGCCGCAGTATGTC
..((((((((((((...((((&))))..))))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_153337
GeneSymbolSNX20
Binding site1591,1611
Score1.0
Seed1
Au0.382
Energy-21.8
Binding len20
Me-5.925
Phylopstem-0.31313539230769233
Phylopflank-0.21102309700000005
Longest consecutive pairings9
Position of longest consecutive pairings5
Pairings in 3prime end5
Position3UTR
2D Structure