Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAACTGCATTTAGCTGCC
..((((((((((((((.....&)))))))))....))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_153337
GeneSymbolSNX20
Binding site888,907
Score0.923
Seed1
Au0.456
Energy-20.5
Binding len19
Me-4.957
Phylopstem-0.3277081111111111
Phylopflank-0.3849839974999999
Longest consecutive pairings9
Position of longest consecutive pairings10
Pairings in 3prime end3
Position3UTR
2D Structure