Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCCAGGTGAAGACGATTCTGGAGAGCCAA
...((((((((((((((((((.&))))))))..))))...........)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_153339
GeneSymbolPUSL1
Binding site798,830
Score1.0
Seed0
Au0.412
Energy-23.2
Binding len32
Me-6.515
Phylopstem0.12302747096774189
Phylopflank0.7427670279999998
Longest consecutive pairings8
Position of longest consecutive pairings24
Pairings in 3prime end7
PositionCDS
2D Structure