Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGGAAGGAAGCCC
....(((((((((((((((...&)))))))))))).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_153345
GeneSymbolTMEM139
Binding site543,560
Score0.987
Seed0
Au0.412
Energy-26.7
Binding len17
Me-9.547
Phylopstem0.13694645625
Phylopflank0.56998467875
Longest consecutive pairings12
Position of longest consecutive pairings5
Pairings in 3prime end5
PositionCDS
2D Structure