Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCTAGCACTTAATATTTGCCAGACATTGTGCCAGGC
.((((((..(((((((......&.))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_153347
GeneSymbolTMEM86A
Binding site3513,3550
Score0.865
Seed1
Au0.603
Energy-19.1
Binding len15
Me-7.163
Phylopstem-0.08642750000000002
Phylopflank0.16729844625
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure