Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCAGAATTAGAGCAGCCAGCAGCTGG
...(((((((((((((.....&.)))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_153348
GeneSymbolFBXW8
Binding site4331,4359
Score0.846
Seed0
Au0.515
Energy-22.6
Binding len16
Me-6.515
Phylopstem-0.030757012857142857
Phylopflank-0.25249747699999997
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure