Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CCCAGGAAGCTCCAGGGCTGAGTGGTCAGGAGCCAGTT
.(((((((((((((((((....&)))))))....................)))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_153350
GeneSymbolFBXL16
Binding site3191,3229
Score0.846
Seed1
Au0.353
Energy-26.5
Binding len38
Me-3.793
Phylopstem2.5540074324324316
Phylopflank2.4955329649999998
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure