Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTATAATATTTTAAGTTGCAGA
((((((((...(((((((((.&)))))))))......)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_153354
GeneSymbolTMEM161B
Binding site2474,2498
Score0.923
Seed1
Au0.765
Energy-18.7
Binding len24
Me-9.061
Phylopstem4.472765555555555
Phylopflank5.21065738125
Longest consecutive pairings9
Position of longest consecutive pairings15
Pairings in 3prime end7
Position3UTR
2D Structure