Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGCTTCATCTACATAGGGTTGCCCAGGG
.(((((((..(.((((((((..&.))))))))..)..)))).))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_153357
GeneSymbolSLC16A11
Binding site1764,1792
Score1.0
Seed1
Au0.353
Energy-21.5
Binding len23
Me-9.439
Phylopstem0.3824139125
Phylopflank0.43385251749999987
Longest consecutive pairings8
Position of longest consecutive pairings14
Pairings in 3prime end6
PositionCDS
2D Structure