Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGGGGGGATACGGAGCAGCGCTGGTGGTGGCCGTGGCTGCGAT
((((((((((((((.......&.)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_153357
GeneSymbolSLC16A11
Binding site1324,1370
Score0.923
Seed1
Au0.25
Energy-23.0
Binding len16
Me-4.906
Phylopstem1.1114477142857142
Phylopflank2.27751245625
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end1
PositionCDS
2D Structure