Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGGCAAATGCCAGTGT
(((((((.....(((((((...&))))))).....))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_153360
GeneSymbolAPCDD1L
Binding site2985,3005
Score0.846
Seed1
Au0.324
Energy-24.1
Binding len20
Me-14.722
Phylopstem4.24806
Phylopflank2.701380405
Longest consecutive pairings7
Position of longest consecutive pairings13
Pairings in 3prime end5
Position3UTR
2D Structure