Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTAATTGTACAGCTAGAGCCTGCAAG
((((((((..(((((((((((&)))).....)))))))..))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_153361
GeneSymbolNIM1K
Binding site601,629
Score0.846
Seed1
Au0.544
Energy-20.5
Binding len28
Me-6.236
Phylopstem-0.6463599125000001
Phylopflank-0.03440017250000001
Longest consecutive pairings7
Position of longest consecutive pairings12
Pairings in 3prime end8
Position5UTR
2D Structure