Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCGGGACATCCACACACCGACCGCTCCTGCT
..((((..(((((((......&.)))))))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_153361
GeneSymbolNIM1K
Binding site81,115
Score0.846
Seed0
Au0.324
Energy-19.4
Binding len15
Me-9.047
Phylopstem-0.24091191428571432
Phylopflank-0.15488102249999997
Longest consecutive pairings7
Position of longest consecutive pairings7
Pairings in 3prime end2
Position5UTR
2D Structure