Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGGCCGGGGTCAGAGGATTGCCGAAGGGAGGCCTTCCTTTCAGTGG
(((((((((((((((((.((((&)))).)))................)))))))).........)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_153362
GeneSymbolPRSS35
Binding site886,934
Score0.846
Seed1
Au0.441
Energy-20.9
Binding len48
Me-3.938
Phylopstem1.7928421452380956
Phylopflank2.4659262825000003
Longest consecutive pairings8
Position of longest consecutive pairings16
Pairings in 3prime end7
PositionCDS
2D Structure