Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&AGCTGCAGCGGCAAC
((((.(((((((((.......&))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_153364
GeneSymbolGARIN6
Binding site501,516
Score1.0
Seed0
Au0.515
Energy-19.6
Binding len15
Me-9.025
Phylopstem1.4628271111111113
Phylopflank0.5102709511249999
Longest consecutive pairings9
Position of longest consecutive pairings6
Pairings in 3prime end1
PositionCDS
2D Structure